Task 4 : KBDOCK Database and Web Server

 

About
  • 2,721 non-redundant hetero DDIs; 1,029 PFAM domain families
  • For each PFAM family, DDIs are superposed and spatially clustered
Web-Server

http://kbdock.loria.fr

Algorithm and Examples

 

  • Provides family-level templates for knowledge-based docking
Reference

A.W. Ghoorah, M. Smail-Tabbone, M.-D. Devignes, D.W. Ritchie, (2013). KBDOCK 2013: A spatial classification of 3D protein domain family interactions. Nucleic Acids Research, in press.  Full Text.